Protein–RNA interactions for Protein: P49279

SLC11A1, Natural resistance-associated macrophage protein 1, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1P49279 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
SLC11A1P49279 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC11A1P49279 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC11A1P49279 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC11A1P49279 AC004899.1-201ENST00000424687 1714 ntBASIC16.08■□□□□ 0.16
SLC11A1P49279 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC11A1P49279 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC11A1P49279 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SLC11A1P49279 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC11A1P49279 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC11A1P49279 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC11A1P49279 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC11A1P49279 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC11A1P49279 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC11A1P49279 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC11A1P49279 TUBB8P8-201ENST00000458717 1058 ntBASIC16.07■□□□□ 0.16
SLC11A1P49279 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC11A1P49279 RN7SL11P-201ENST00000471305 293 ntBASIC16.07■□□□□ 0.16
SLC11A1P49279 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC11A1P49279 AC106794.1-201ENST00000506935 792 ntBASIC16.07■□□□□ 0.16
SLC11A1P49279 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC11A1P49279 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SLC11A1P49279 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC11A1P49279 AC091544.8-201ENST00000619490 361 ntBASIC16.07■□□□□ 0.16
SLC11A1P49279 AC091812.3-201ENST00000621362 345 ntBASIC16.07■□□□□ 0.16
SLC11A1P49279 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.07■□□□□ 0.16
SLC11A1P49279 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC11A1P49279 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 SHC1P1-201ENST00000425230 1745 ntBASIC16.07■□□□□ 0.16
SLC11A1P49279 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC11A1P49279 AC020658.6-201ENST00000623564 1870 ntBASIC16.07■□□□□ 0.16
SLC11A1P49279 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC11A1P49279 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC11A1P49279 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.07■□□□□ 0.16
SLC11A1P49279 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC11A1P49279 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC11A1P49279 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC11A1P49279 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC11A1P49279 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC11A1P49279 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC11A1P49279 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC11A1P49279 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC11A1P49279 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC11A1P49279 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC11A1P49279 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SLC11A1P49279 ELK2AP-201ENST00000392510 1007 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 ACTG1P2-201ENST00000415776 1125 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 ACTG1P11-201ENST00000425411 1125 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC11A1P49279 RN7SL769P-201ENST00000469386 295 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC11A1P49279 AC245884.6-201ENST00000515672 1067 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC11A1P49279 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC11A1P49279 RN7SL163P-201ENST00000583100 276 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC11A1P49279 AC026740.1-201ENST00000607068 791 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 CU633904.3-201ENST00000624042 1029 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 AC015967.2-201ENST00000624092 234 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 AC006435.4-201ENST00000625037 234 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 AL356737.1-201ENST00000634391 234 ntBASIC16.06■□□□□ 0.16
SLC11A1P49279 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC11A1P49279 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC11A1P49279 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms