Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.42□□□□□ -0.1
GABRA4P48169 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 ACTBP11-201ENST00000436287 1126 ntBASIC14.42□□□□□ -0.1
GABRA4P48169 AC092658.1-201ENST00000505836 891 ntBASIC14.42□□□□□ -0.1
GABRA4P48169 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 AC106820.3-201ENST00000561653 397 ntBASIC14.42□□□□□ -0.1
GABRA4P48169 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.42□□□□□ -0.1
GABRA4P48169 AC010328.2-201ENST00000597698 1111 ntBASIC14.42□□□□□ -0.1
GABRA4P48169 AC138466.3-201ENST00000619983 221 ntBASIC14.42□□□□□ -0.1
GABRA4P48169 MIR6799-201ENST00000620297 69 ntBASIC14.42□□□□□ -0.1
GABRA4P48169 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 LILRP1-201ENST00000444199 1370 ntBASIC14.42□□□□□ -0.1
GABRA4P48169 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.42□□□□□ -0.1
GABRA4P48169 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.42□□□□□ -0.1
GABRA4P48169 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.42□□□□□ -0.1
GABRA4P48169 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
GABRA4P48169 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA4P48169 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA4P48169 REXO1L2P-201ENST00000425429 2069 ntBASIC14.42□□□□□ -0.1
GABRA4P48169 AC007326.2-201ENST00000624224 7579 ntBASIC14.41□□□□□ -0.1
GABRA4P48169 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
GABRA4P48169 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
GABRA4P48169 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 AC022532.1-201ENST00000624563 1728 ntBASIC14.41□□□□□ -0.1
GABRA4P48169 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GABRA4P48169 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GABRA4P48169 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.41□□□□□ -0.1
GABRA4P48169 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 FAM86MP-201ENST00000340703 885 ntBASIC14.41□□□□□ -0.1
GABRA4P48169 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.41□□□□□ -0.1
GABRA4P48169 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GABRA4P48169 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.41□□□□□ -0.1
GABRA4P48169 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.41□□□□□ -0.1
GABRA4P48169 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.41□□□□□ -0.1
GABRA4P48169 FAM8A4P-201ENST00000435433 1213 ntBASIC14.41□□□□□ -0.1
GABRA4P48169 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 RPL13AP20-201ENST00000459725 609 ntBASIC14.41□□□□□ -0.1
GABRA4P48169 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.41□□□□□ -0.1
GABRA4P48169 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
GABRA4P48169 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.41□□□□□ -0.1
GABRA4P48169 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GABRA4P48169 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.41□□□□□ -0.1
GABRA4P48169 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.41□□□□□ -0.1
GABRA4P48169 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.41□□□□□ -0.1
GABRA4P48169 WASH3P-207ENST00000560956 1394 ntBASIC14.41□□□□□ -0.1
GABRA4P48169 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
GABRA4P48169 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.41□□□□□ -0.1
GABRA4P48169 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
GABRA4P48169 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
GABRA4P48169 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 AC103702.1-201ENST00000548801 2630 ntBASIC14.41□□□□□ -0.1
GABRA4P48169 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms