Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CBX5P45973 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.28□□□□□ -0.28
CBX5P45973 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.28□□□□□ -0.28
CBX5P45973 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.28□□□□□ -0.28
CBX5P45973 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CBX5P45973 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
CBX5P45973 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CBX5P45973 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CBX5P45973 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CBX5P45973 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CBX5P45973 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.27□□□□□ -0.28
CBX5P45973 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.27□□□□□ -0.28
CBX5P45973 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CBX5P45973 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CBX5P45973 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.27□□□□□ -0.28
CBX5P45973 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CBX5P45973 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CBX5P45973 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.27□□□□□ -0.29
CBX5P45973 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CBX5P45973 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.27□□□□□ -0.29
CBX5P45973 AL139010.1-201ENST00000454878 894 ntBASIC13.27□□□□□ -0.29
CBX5P45973 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.27□□□□□ -0.29
CBX5P45973 AC011467.4-201ENST00000594891 528 ntBASIC13.27□□□□□ -0.29
CBX5P45973 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.27□□□□□ -0.29
CBX5P45973 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CBX5P45973 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.27□□□□□ -0.29
CBX5P45973 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.27□□□□□ -0.29
CBX5P45973 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CBX5P45973 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CBX5P45973 AOC4P-203ENST00000566825 2289 ntBASIC13.27□□□□□ -0.29
CBX5P45973 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.27□□□□□ -0.29
CBX5P45973 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CBX5P45973 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.26□□□□□ -0.29
CBX5P45973 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CBX5P45973 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.26□□□□□ -0.29
CBX5P45973 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.26□□□□□ -0.29
CBX5P45973 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CBX5P45973 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.26□□□□□ -0.29
CBX5P45973 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.26□□□□□ -0.29
CBX5P45973 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CBX5P45973 AC002056.1-201ENST00000395613 760 ntBASIC13.26□□□□□ -0.29
CBX5P45973 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.26□□□□□ -0.29
CBX5P45973 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.26□□□□□ -0.29
CBX5P45973 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CBX5P45973 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.26□□□□□ -0.29
CBX5P45973 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.26□□□□□ -0.29
CBX5P45973 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CBX5P45973 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms