Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.38■□□□□ 0.21
SSR1P43307 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.38■□□□□ 0.21
SSR1P43307 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSR1P43307 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.38■□□□□ 0.21
SSR1P43307 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSR1P43307 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.38■□□□□ 0.21
SSR1P43307 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSR1P43307 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SSR1P43307 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.38■□□□□ 0.21
SSR1P43307 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SSR1P43307 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSR1P43307 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSR1P43307 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.38■□□□□ 0.21
SSR1P43307 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSR1P43307 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSR1P43307 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSR1P43307 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SSR1P43307 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSR1P43307 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSR1P43307 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SSR1P43307 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.37■□□□□ 0.21
SSR1P43307 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 AC087386.2-201ENST00000623212 4637 ntBASIC16.37■□□□□ 0.21
SSR1P43307 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.37■□□□□ 0.21
SSR1P43307 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.37■□□□□ 0.21
SSR1P43307 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.37■□□□□ 0.21
SSR1P43307 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 RN7SL618P-201ENST00000477850 296 ntBASIC16.37■□□□□ 0.21
SSR1P43307 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.37■□□□□ 0.21
SSR1P43307 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.37■□□□□ 0.21
SSR1P43307 SLED1-202ENST00000512051 380 ntBASIC16.37■□□□□ 0.21
SSR1P43307 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.37■□□□□ 0.21
SSR1P43307 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.37■□□□□ 0.21
SSR1P43307 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 AL138828.2-201ENST00000615812 383 ntBASIC16.37■□□□□ 0.21
SSR1P43307 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.37■□□□□ 0.21
SSR1P43307 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.37■□□□□ 0.21
SSR1P43307 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.37■□□□□ 0.21
SSR1P43307 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.37■□□□□ 0.21
SSR1P43307 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSR1P43307 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SSR1P43307 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.36■□□□□ 0.21
SSR1P43307 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.36■□□□□ 0.21
SSR1P43307 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 KRT18P64-201ENST00000434946 1219 ntBASIC16.36■□□□□ 0.21
SSR1P43307 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.36■□□□□ 0.21
SSR1P43307 KLF2P3-201ENST00000451977 1087 ntBASIC16.36■□□□□ 0.21
SSR1P43307 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.36■□□□□ 0.21
SSR1P43307 AC069120.2-201ENST00000524091 540 ntBASIC16.36■□□□□ 0.21
SSR1P43307 AC027369.6-201ENST00000525520 931 ntBASIC16.36■□□□□ 0.21
SSR1P43307 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.36■□□□□ 0.21
SSR1P43307 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.36■□□□□ 0.21
SSR1P43307 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.36■□□□□ 0.21
SSR1P43307 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms