Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC134698.3-201ENST00000523880 214 ntBASIC15.97■□□□□ 0.15
MTHFRP42898 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.97■□□□□ 0.15
MTHFRP42898 MIR3907-201ENST00000579424 151 ntBASIC15.97■□□□□ 0.15
MTHFRP42898 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
MTHFRP42898 AC073413.1-201ENST00000603927 732 ntBASIC15.97■□□□□ 0.15
MTHFRP42898 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 AP001002.3-201ENST00000623482 206 ntBASIC15.97■□□□□ 0.15
MTHFRP42898 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 AL603764.1-201ENST00000636452 321 ntBASIC15.97■□□□□ 0.15
MTHFRP42898 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.97■□□□□ 0.15
MTHFRP42898 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MTHFRP42898 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 KRT8P4-201ENST00000509735 1454 ntBASIC15.97■□□□□ 0.15
MTHFRP42898 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.97■□□□□ 0.15
MTHFRP42898 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.97■□□□□ 0.15
MTHFRP42898 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
MTHFRP42898 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.96■□□□□ 0.15
MTHFRP42898 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MTHFRP42898 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.96■□□□□ 0.15
MTHFRP42898 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.96■□□□□ 0.15
MTHFRP42898 AC091046.1-201ENST00000331871 207 ntBASIC15.96■□□□□ 0.15
MTHFRP42898 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MTHFRP42898 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MTHFRP42898 AC104457.1-201ENST00000401024 814 ntBASIC15.96■□□□□ 0.15
MTHFRP42898 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.96■□□□□ 0.15
MTHFRP42898 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.96■□□□□ 0.15
MTHFRP42898 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.96■□□□□ 0.15
MTHFRP42898 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.96■□□□□ 0.15
MTHFRP42898 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.96■□□□□ 0.15
MTHFRP42898 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 AC106794.1-201ENST00000506935 792 ntBASIC15.96■□□□□ 0.15
MTHFRP42898 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.96■□□□□ 0.15
MTHFRP42898 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.96■□□□□ 0.15
MTHFRP42898 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.96■□□□□ 0.15
MTHFRP42898 AC005730.2-201ENST00000564549 1184 ntBASIC15.96■□□□□ 0.15
MTHFRP42898 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.96■□□□□ 0.15
MTHFRP42898 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.96■□□□□ 0.15
MTHFRP42898 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.96■□□□□ 0.15
MTHFRP42898 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.96■□□□□ 0.15
MTHFRP42898 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.96■□□□□ 0.15
MTHFRP42898 MIR7845-201ENST00000618396 99 ntBASIC15.96■□□□□ 0.15
MTHFRP42898 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MTHFRP42898 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.96■□□□□ 0.15
MTHFRP42898 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.96■□□□□ 0.15
MTHFRP42898 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.96■□□□□ 0.15
MTHFRP42898 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 KRT8P29-201ENST00000420409 1371 ntBASIC15.96■□□□□ 0.15
MTHFRP42898 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MTHFRP42898 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.96■□□□□ 0.15
MTHFRP42898 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.96■□□□□ 0.15
MTHFRP42898 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
MTHFRP42898 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.96■□□□□ 0.14
MTHFRP42898 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MTHFRP42898 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
MTHFRP42898 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MTHFRP42898 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
MTHFRP42898 AC007787.1-201ENST00000588095 1583 ntBASIC15.96■□□□□ 0.14
MTHFRP42898 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
MTHFRP42898 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
MTHFRP42898 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.96■□□□□ 0.14
MTHFRP42898 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MTHFRP42898 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.95■□□□□ 0.14
MTHFRP42898 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MTHFRP42898 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.95■□□□□ 0.14
MTHFRP42898 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
MTHFRP42898 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MTHFRP42898 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MTHFRP42898 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MTHFRP42898 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MTHFRP42898 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MTHFRP42898 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.95■□□□□ 0.14
MTHFRP42898 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MTHFRP42898 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.95■□□□□ 0.14
MTHFRP42898 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
MTHFRP42898 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MTHFRP42898 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MTHFRP42898 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MTHFRP42898 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms