Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.48■□□□□ 0.39
CLCN1P35523 KRT18P58-201ENST00000527480 1120 ntBASIC17.48■□□□□ 0.39
CLCN1P35523 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCN1P35523 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCN1P35523 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 AL138918.1-201ENST00000568306 659 ntBASIC17.48■□□□□ 0.39
CLCN1P35523 RN7SL602P-201ENST00000578326 324 ntBASIC17.48■□□□□ 0.39
CLCN1P35523 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.48■□□□□ 0.39
CLCN1P35523 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLCN1P35523 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCN1P35523 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCN1P35523 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLCN1P35523 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCN1P35523 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN1P35523 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN1P35523 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.47■□□□□ 0.39
CLCN1P35523 POLD2P1-201ENST00000511220 997 ntBASIC17.47■□□□□ 0.39
CLCN1P35523 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.47■□□□□ 0.39
CLCN1P35523 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 AC091812.2-201ENST00000619081 385 ntBASIC17.47■□□□□ 0.39
CLCN1P35523 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN1P35523 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.47■□□□□ 0.39
CLCN1P35523 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CLCN1P35523 AC092902.6-201ENST00000641783 218 ntBASIC17.47■□□□□ 0.39
CLCN1P35523 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN1P35523 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN1P35523 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CLCN1P35523 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLCN1P35523 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN1P35523 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.47■□□□□ 0.39
CLCN1P35523 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN1P35523 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN1P35523 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN1P35523 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN1P35523 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN1P35523 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN1P35523 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLCN1P35523 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 AP000347.1-202ENST00000435868 847 ntBASIC17.46■□□□□ 0.39
CLCN1P35523 TMEM198B-204ENST00000484016 896 ntBASIC17.46■□□□□ 0.39
CLCN1P35523 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN1P35523 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.46■□□□□ 0.39
CLCN1P35523 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCN1P35523 AC040169.1-201ENST00000565382 521 ntBASIC17.46■□□□□ 0.39
CLCN1P35523 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCN1P35523 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN1P35523 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CLCN1P35523 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN1P35523 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN1P35523 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 AC126335.2-201ENST00000623362 4637 ntBASIC17.46■□□□□ 0.39
CLCN1P35523 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN1P35523 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CLCN1P35523 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms