Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40LGP29965 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CD40LGP29965 KRT8P22-201ENST00000562317 1415 ntBASIC13.64□□□□□ -0.23
CD40LGP29965 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.63□□□□□ -0.23
CD40LGP29965 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD40LGP29965 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.63□□□□□ -0.23
CD40LGP29965 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 SLC25A6P2-201ENST00000497974 877 ntBASIC13.63□□□□□ -0.23
CD40LGP29965 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.63□□□□□ -0.23
CD40LGP29965 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.63□□□□□ -0.23
CD40LGP29965 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.63□□□□□ -0.23
CD40LGP29965 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
CD40LGP29965 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CD40LGP29965 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40LGP29965 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.62□□□□□ -0.23
CD40LGP29965 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.62□□□□□ -0.23
CD40LGP29965 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.62□□□□□ -0.23
CD40LGP29965 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CD40LGP29965 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CD40LGP29965 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.62□□□□□ -0.23
CD40LGP29965 PRYP5-201ENST00000451909 266 ntBASIC13.62□□□□□ -0.23
CD40LGP29965 AF186996.4-201ENST00000467186 377 ntBASIC13.62□□□□□ -0.23
CD40LGP29965 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.62□□□□□ -0.23
CD40LGP29965 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.62□□□□□ -0.23
CD40LGP29965 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.62□□□□□ -0.23
CD40LGP29965 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.62□□□□□ -0.23
CD40LGP29965 AP001269.4-201ENST00000609611 512 ntBASIC13.62□□□□□ -0.23
CD40LGP29965 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.62□□□□□ -0.23
CD40LGP29965 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40LGP29965 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CD40LGP29965 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms