Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP11P24347 PDIA3P1-201ENST00000471856 1510 ntBASIC14.55□□□□□ -0.08
MMP11P24347 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP11P24347 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP11P24347 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MMP11P24347 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MMP11P24347 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP11P24347 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 AC127383.1-201ENST00000444697 1800 ntBASIC14.55□□□□□ -0.08
MMP11P24347 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.54□□□□□ -0.08
MMP11P24347 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.54□□□□□ -0.08
MMP11P24347 KLF2P4-201ENST00000451959 1225 ntBASIC14.54□□□□□ -0.08
MMP11P24347 AC093433.1-201ENST00000458048 571 ntBASIC14.54□□□□□ -0.08
MMP11P24347 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.54□□□□□ -0.08
MMP11P24347 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.54□□□□□ -0.08
MMP11P24347 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.54□□□□□ -0.08
MMP11P24347 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
MMP11P24347 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
MMP11P24347 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.54□□□□□ -0.08
MMP11P24347 AC107373.2-201ENST00000607735 490 ntBASIC14.54□□□□□ -0.08
MMP11P24347 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 AC134312.5-201ENST00000568031 1313 ntBASIC14.54□□□□□ -0.08
MMP11P24347 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MMP11P24347 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.54□□□□□ -0.08
MMP11P24347 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MMP11P24347 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP11P24347 AC067930.6-201ENST00000623257 4947 ntBASIC14.54□□□□□ -0.08
MMP11P24347 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
MMP11P24347 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MMP11P24347 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
MMP11P24347 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MMP11P24347 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
MMP11P24347 KRT8P44-201ENST00000441609 1350 ntBASIC14.53□□□□□ -0.08
MMP11P24347 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP11P24347 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 ANKRD19P-201ENST00000338192 862 ntBASIC14.53□□□□□ -0.08
MMP11P24347 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 HLA-V-201ENST00000429037 534 ntBASIC14.53□□□□□ -0.08
MMP11P24347 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
MMP11P24347 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.53□□□□□ -0.08
MMP11P24347 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.53□□□□□ -0.08
MMP11P24347 CTBP2P5-201ENST00000454986 1264 ntBASIC14.53□□□□□ -0.08
MMP11P24347 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
MMP11P24347 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
MMP11P24347 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP11P24347 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.53□□□□□ -0.08
MMP11P24347 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.53□□□□□ -0.08
MMP11P24347 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.53□□□□□ -0.08
MMP11P24347 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP11P24347 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.53□□□□□ -0.08
MMP11P24347 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MMP11P24347 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MMP11P24347 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP11P24347 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms