Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR4A1P22736 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR4A1P22736 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.33□□□□□ -0.11
NR4A1P22736 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR4A1P22736 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NR4A1P22736 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A1P22736 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NR4A1P22736 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A1P22736 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A1P22736 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.33□□□□□ -0.12
NR4A1P22736 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A1P22736 KRT8P48-201ENST00000515599 1220 ntBASIC14.33□□□□□ -0.12
NR4A1P22736 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A1P22736 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 AC022145.2-201ENST00000598203 171 ntBASIC14.33□□□□□ -0.12
NR4A1P22736 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.33□□□□□ -0.12
NR4A1P22736 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.33□□□□□ -0.12
NR4A1P22736 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NR4A1P22736 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.33□□□□□ -0.12
NR4A1P22736 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NR4A1P22736 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.33□□□□□ -0.12
NR4A1P22736 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
NR4A1P22736 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.33□□□□□ -0.12
NR4A1P22736 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
NR4A1P22736 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NR4A1P22736 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NR4A1P22736 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.33□□□□□ -0.12
NR4A1P22736 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.33□□□□□ -0.12
NR4A1P22736 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A1P22736 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NR4A1P22736 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NR4A1P22736 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.32□□□□□ -0.12
NR4A1P22736 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.32□□□□□ -0.12
NR4A1P22736 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NR4A1P22736 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NR4A1P22736 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.32□□□□□ -0.12
NR4A1P22736 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NR4A1P22736 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.32□□□□□ -0.12
NR4A1P22736 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.32□□□□□ -0.12
NR4A1P22736 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR4A1P22736 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.32□□□□□ -0.12
NR4A1P22736 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.32□□□□□ -0.12
NR4A1P22736 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NR4A1P22736 KRT18P34-201ENST00000488218 1270 ntBASIC14.32□□□□□ -0.12
NR4A1P22736 AC079140.1-201ENST00000508039 487 ntBASIC14.32□□□□□ -0.12
NR4A1P22736 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.32□□□□□ -0.12
NR4A1P22736 AC243562.1-201ENST00000560672 389 ntBASIC14.32□□□□□ -0.12
NR4A1P22736 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.32□□□□□ -0.12
NR4A1P22736 AC004835.2-201ENST00000603762 682 ntBASIC14.32□□□□□ -0.12
NR4A1P22736 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.32□□□□□ -0.12
NR4A1P22736 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms