Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.4■□□□□ 0.22
SYN1P17600 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 AL807761.2-201ENST00000422849 729 ntBASIC16.4■□□□□ 0.22
SYN1P17600 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 HLA-K-203ENST00000430151 1046 ntBASIC16.4■□□□□ 0.22
SYN1P17600 PSMD4P1-201ENST00000433951 1109 ntBASIC16.4■□□□□ 0.22
SYN1P17600 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.4■□□□□ 0.22
SYN1P17600 DUX4L47-201ENST00000566374 394 ntBASIC16.4■□□□□ 0.22
SYN1P17600 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SYN1P17600 PHBP15-201ENST00000574228 665 ntBASIC16.4■□□□□ 0.22
SYN1P17600 SIGLEC18P-201ENST00000602271 909 ntBASIC16.4■□□□□ 0.22
SYN1P17600 AC084781.1-201ENST00000613737 656 ntBASIC16.4■□□□□ 0.22
SYN1P17600 Z98259.2-201ENST00000641583 609 ntBASIC16.4■□□□□ 0.22
SYN1P17600 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SYN1P17600 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYN1P17600 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.4■□□□□ 0.22
SYN1P17600 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
SYN1P17600 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.39■□□□□ 0.22
SYN1P17600 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SYN1P17600 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.39■□□□□ 0.21
SYN1P17600 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.39■□□□□ 0.21
SYN1P17600 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYN1P17600 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SYN1P17600 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.39■□□□□ 0.21
SYN1P17600 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 ACTBP7-201ENST00000418351 1124 ntBASIC16.39■□□□□ 0.21
SYN1P17600 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.39■□□□□ 0.21
SYN1P17600 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.39■□□□□ 0.21
SYN1P17600 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
SYN1P17600 CR383656.3-201ENST00000551315 183 ntBASIC16.39■□□□□ 0.21
SYN1P17600 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
SYN1P17600 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.39■□□□□ 0.21
SYN1P17600 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYN1P17600 AC093752.3-201ENST00000567343 901 ntBASIC16.39■□□□□ 0.21
SYN1P17600 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SYN1P17600 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 AC073592.2-201ENST00000623062 780 ntBASIC16.39■□□□□ 0.21
SYN1P17600 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SYN1P17600 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYN1P17600 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.39■□□□□ 0.21
SYN1P17600 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYN1P17600 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.38■□□□□ 0.21
SYN1P17600 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SYN1P17600 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SYN1P17600 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.38■□□□□ 0.21
SYN1P17600 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SYN1P17600 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.38■□□□□ 0.21
SYN1P17600 MIR648-201ENST00000385046 94 ntBASIC16.38■□□□□ 0.21
SYN1P17600 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SYN1P17600 AL357563.1-201ENST00000404728 395 ntBASIC16.38■□□□□ 0.21
SYN1P17600 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.38■□□□□ 0.21
SYN1P17600 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 NUDT4P2-201ENST00000578341 546 ntBASIC16.38■□□□□ 0.21
SYN1P17600 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.38■□□□□ 0.21
SYN1P17600 AC009884.2-201ENST00000603110 324 ntBASIC16.38■□□□□ 0.21
SYN1P17600 AC007326.1-201ENST00000604539 458 ntBASIC16.38■□□□□ 0.21
SYN1P17600 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
SYN1P17600 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYN1P17600 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.38■□□□□ 0.21
SYN1P17600 AC011840.2-201ENST00000563063 1520 ntBASIC16.38■□□□□ 0.21
SYN1P17600 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms