Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRKCAP17252 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PRKCAP17252 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PRKCAP17252 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PRKCAP17252 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PRKCAP17252 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 AC015922.1-201ENST00000421102 1152 ntBASIC14.27□□□□□ -0.13
PRKCAP17252 KRT18P64-201ENST00000434946 1219 ntBASIC14.27□□□□□ -0.13
PRKCAP17252 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.27□□□□□ -0.13
PRKCAP17252 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.27□□□□□ -0.13
PRKCAP17252 AC004840.1-201ENST00000636359 365 ntBASIC14.27□□□□□ -0.13
PRKCAP17252 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PRKCAP17252 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.27□□□□□ -0.13
PRKCAP17252 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PRKCAP17252 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PRKCAP17252 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.27□□□□□ -0.13
PRKCAP17252 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.27□□□□□ -0.13
PRKCAP17252 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PRKCAP17252 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRKCAP17252 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.26□□□□□ -0.13
PRKCAP17252 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PRKCAP17252 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.26□□□□□ -0.13
PRKCAP17252 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.26□□□□□ -0.13
PRKCAP17252 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.26□□□□□ -0.13
PRKCAP17252 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
PRKCAP17252 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 FAM8A3P-201ENST00000427218 844 ntBASIC14.26□□□□□ -0.13
PRKCAP17252 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.26□□□□□ -0.13
PRKCAP17252 INGX-202ENST00000489074 768 ntBASIC14.26□□□□□ -0.13
PRKCAP17252 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 AC135586.1-201ENST00000539323 574 ntBASIC14.26□□□□□ -0.13
PRKCAP17252 AC092337.1-201ENST00000568699 1129 ntBASIC14.26□□□□□ -0.13
PRKCAP17252 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.26□□□□□ -0.13
PRKCAP17252 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PRKCAP17252 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PRKCAP17252 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.26□□□□□ -0.13
PRKCAP17252 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.26□□□□□ -0.13
PRKCAP17252 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PRKCAP17252 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.26□□□□□ -0.13
PRKCAP17252 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.26□□□□□ -0.13
PRKCAP17252 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRKCAP17252 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
PRKCAP17252 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PRKCAP17252 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PRKCAP17252 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PRKCAP17252 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.25□□□□□ -0.13
PRKCAP17252 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms