Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM17P0DL12 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.5□□□□□ -0.57
SMIM17P0DL12 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.5□□□□□ -0.57
SMIM17P0DL12 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM17P0DL12 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM17P0DL12 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM17P0DL12 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM17P0DL12 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.5□□□□□ -0.57
SMIM17P0DL12 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM17P0DL12 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.5□□□□□ -0.57
SMIM17P0DL12 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SMIM17P0DL12 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM17P0DL12 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.5□□□□□ -0.57
SMIM17P0DL12 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
SMIM17P0DL12 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC11.5□□□□□ -0.57
SMIM17P0DL12 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 GPX1P2-201ENST00000429271 606 ntBASIC11.49□□□□□ -0.57
SMIM17P0DL12 AC140658.5-201ENST00000438532 169 ntBASIC11.49□□□□□ -0.57
SMIM17P0DL12 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 AC012640.2-201ENST00000561606 901 ntBASIC11.49□□□□□ -0.57
SMIM17P0DL12 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 INTS4P1-203ENST00000641008 3683 ntBASIC11.49□□□□□ -0.57
SMIM17P0DL12 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 PCDHA5-203ENST00000614258 4248 ntBASIC11.49□□□□□ -0.57
SMIM17P0DL12 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM17P0DL12 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM17P0DL12 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 AJ011931.1-201ENST00000618749 2492 ntBASIC11.48□□□□□ -0.57
SMIM17P0DL12 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms