Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.75□□□□□ -0.37
CTSDP07339 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
CTSDP07339 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.75□□□□□ -0.37
CTSDP07339 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CTSDP07339 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.75□□□□□ -0.37
CTSDP07339 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CTSDP07339 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.75□□□□□ -0.37
CTSDP07339 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 ZNF259P1-201ENST00000407656 1365 ntBASIC12.75□□□□□ -0.37
CTSDP07339 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CTSDP07339 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.75□□□□□ -0.37
CTSDP07339 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.75□□□□□ -0.37
CTSDP07339 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.75□□□□□ -0.37
CTSDP07339 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.75□□□□□ -0.37
CTSDP07339 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.75□□□□□ -0.37
CTSDP07339 AC145285.3-201ENST00000564603 959 ntBASIC12.75□□□□□ -0.37
CTSDP07339 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.75□□□□□ -0.37
CTSDP07339 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.75□□□□□ -0.37
CTSDP07339 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.75□□□□□ -0.37
CTSDP07339 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.75□□□□□ -0.37
CTSDP07339 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 AP3S2-216ENST00000617003 1561 ntBASIC12.75□□□□□ -0.37
CTSDP07339 AC011474.4-201ENST00000623523 2076 ntBASIC12.75□□□□□ -0.37
CTSDP07339 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.75□□□□□ -0.37
CTSDP07339 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CTSDP07339 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CTSDP07339 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.74□□□□□ -0.37
CTSDP07339 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.74□□□□□ -0.37
CTSDP07339 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CTSDP07339 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CTSDP07339 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CTSDP07339 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.74□□□□□ -0.37
CTSDP07339 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.74□□□□□ -0.37
CTSDP07339 TARDBPP1-201ENST00000442013 1203 ntBASIC12.74□□□□□ -0.37
CTSDP07339 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.74□□□□□ -0.37
CTSDP07339 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.74□□□□□ -0.37
CTSDP07339 SLC25A1P1-201ENST00000528351 927 ntBASIC12.74□□□□□ -0.37
CTSDP07339 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.74□□□□□ -0.37
CTSDP07339 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.74□□□□□ -0.37
CTSDP07339 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.74□□□□□ -0.37
CTSDP07339 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.74□□□□□ -0.37
CTSDP07339 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.74□□□□□ -0.37
CTSDP07339 KRT8P23-201ENST00000560090 1207 ntBASIC12.74□□□□□ -0.37
CTSDP07339 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CTSDP07339 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CTSDP07339 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CTSDP07339 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.74□□□□□ -0.37
CTSDP07339 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms