Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.43■□□□□ 0.22
TUBB4AP04350 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TUBB4AP04350 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 LILRP1-201ENST00000444199 1370 ntBASIC16.43■□□□□ 0.22
TUBB4AP04350 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.43■□□□□ 0.22
TUBB4AP04350 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
TUBB4AP04350 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.43■□□□□ 0.22
TUBB4AP04350 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
TUBB4AP04350 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.43■□□□□ 0.22
TUBB4AP04350 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.43■□□□□ 0.22
TUBB4AP04350 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TUBB4AP04350 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TUBB4AP04350 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TUBB4AP04350 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TUBB4AP04350 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.42■□□□□ 0.22
TUBB4AP04350 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.42■□□□□ 0.22
TUBB4AP04350 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.42■□□□□ 0.22
TUBB4AP04350 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.42■□□□□ 0.22
TUBB4AP04350 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TUBB4AP04350 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TUBB4AP04350 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.42■□□□□ 0.22
TUBB4AP04350 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.42■□□□□ 0.22
TUBB4AP04350 VN2R19P-201ENST00000442399 1052 ntBASIC16.42■□□□□ 0.22
TUBB4AP04350 AC073648.2-201ENST00000510116 352 ntBASIC16.42■□□□□ 0.22
TUBB4AP04350 RNA5SP410-201ENST00000516285 106 ntBASIC16.42■□□□□ 0.22
TUBB4AP04350 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.42■□□□□ 0.22
TUBB4AP04350 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.42■□□□□ 0.22
TUBB4AP04350 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.42■□□□□ 0.22
TUBB4AP04350 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TUBB4AP04350 MIR4751-201ENST00000578027 74 ntBASIC16.42■□□□□ 0.22
TUBB4AP04350 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
TUBB4AP04350 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.42■□□□□ 0.22
TUBB4AP04350 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.42■□□□□ 0.22
TUBB4AP04350 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.42■□□□□ 0.22
TUBB4AP04350 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TUBB4AP04350 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TUBB4AP04350 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TUBB4AP04350 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBB4AP04350 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms