Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
HMGCRP04035 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGCRP04035 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HMGCRP04035 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGCRP04035 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HMGCRP04035 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGCRP04035 RN7SL8P-201ENST00000461771 266 ntBASIC17.1■□□□□ 0.33
HMGCRP04035 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGCRP04035 MIR4754-201ENST00000582477 89 ntBASIC17.1■□□□□ 0.33
HMGCRP04035 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HMGCRP04035 AC004466.1-201ENST00000599515 1080 ntBASIC17.1■□□□□ 0.33
HMGCRP04035 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.1■□□□□ 0.33
HMGCRP04035 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGCRP04035 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGCRP04035 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 FKBP4P6-201ENST00000457486 1332 ntBASIC17.1■□□□□ 0.33
HMGCRP04035 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGCRP04035 AC084364.1-201ENST00000551967 1556 ntBASIC17.1■□□□□ 0.33
HMGCRP04035 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCRP04035 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HMGCRP04035 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCRP04035 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HMGCRP04035 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.09■□□□□ 0.33
HMGCRP04035 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.09■□□□□ 0.33
HMGCRP04035 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.09■□□□□ 0.33
HMGCRP04035 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 RPSAP31-201ENST00000416648 895 ntBASIC17.09■□□□□ 0.33
HMGCRP04035 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCRP04035 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGCRP04035 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.09■□□□□ 0.33
HMGCRP04035 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.09■□□□□ 0.33
HMGCRP04035 AL132994.2-201ENST00000603120 687 ntBASIC17.09■□□□□ 0.33
HMGCRP04035 AL805961.1-201ENST00000642026 753 ntBASIC17.09■□□□□ 0.33
HMGCRP04035 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HMGCRP04035 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCRP04035 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCRP04035 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 AL365203.3-201ENST00000609742 2057 ntBASIC17.09■□□□□ 0.33
HMGCRP04035 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HMGCRP04035 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HMGCRP04035 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGCRP04035 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCRP04035 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCRP04035 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HMGCRP04035 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCRP04035 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.08■□□□□ 0.33
HMGCRP04035 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.08■□□□□ 0.33
HMGCRP04035 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCRP04035 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCRP04035 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HMGCRP04035 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.08■□□□□ 0.33
HMGCRP04035 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HMGCRP04035 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
HMGCRP04035 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HMGCRP04035 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCRP04035 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCRP04035 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HMGCRP04035 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
HMGCRP04035 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 RPL18P13-201ENST00000478088 569 ntBASIC17.08■□□□□ 0.32
HMGCRP04035 RCC2P8-201ENST00000502779 1035 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms