Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC006122.1-201ENST00000493323 440 ntBASIC17.15■□□□□ 0.34
ALDH1A1P00352 AC114947.1-202ENST00000514136 344 ntBASIC17.15■□□□□ 0.34
ALDH1A1P00352 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 AC027601.3-201ENST00000622907 509 ntBASIC17.15■□□□□ 0.34
ALDH1A1P00352 AC005618.3-201ENST00000624928 458 ntBASIC17.15■□□□□ 0.34
ALDH1A1P00352 CASP16P-204ENST00000635032 809 ntBASIC17.15■□□□□ 0.34
ALDH1A1P00352 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 AL138725.1-201ENST00000407347 1314 ntBASIC17.15■□□□□ 0.34
ALDH1A1P00352 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.14■□□□□ 0.34
ALDH1A1P00352 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.34
ALDH1A1P00352 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
ALDH1A1P00352 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 AL354861.1-201ENST00000445213 355 ntBASIC17.14■□□□□ 0.33
ALDH1A1P00352 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 AC012158.2-201ENST00000536546 354 ntBASIC17.14■□□□□ 0.33
ALDH1A1P00352 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 MIR4472-1-201ENST00000584349 80 ntBASIC17.14■□□□□ 0.33
ALDH1A1P00352 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 AC133540.1-201ENST00000620845 1019 ntBASIC17.14■□□□□ 0.33
ALDH1A1P00352 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 LINC00431-202ENST00000636375 159 ntBASIC17.14■□□□□ 0.33
ALDH1A1P00352 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 AC127383.1-201ENST00000444697 1800 ntBASIC17.14■□□□□ 0.33
ALDH1A1P00352 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.14■□□□□ 0.33
ALDH1A1P00352 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALDH1A1P00352 KRT8P31-201ENST00000504812 1408 ntBASIC17.13■□□□□ 0.33
ALDH1A1P00352 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 AC092171.3-201ENST00000610122 2651 ntBASIC17.13■□□□□ 0.33
ALDH1A1P00352 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 TSPY25P-201ENST00000429463 745 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 245.6 ms