Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC012085.1-201ENST00000548270 765 ntBASIC15.2■□□□□ 0.02
PCDHGA12O60330 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 AL138709.1-201ENST00000614840 1693 ntBASIC15.19■□□□□ 0.02
PCDHGA12O60330 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 AL591846.1-201ENST00000451736 433 ntBASIC15.19■□□□□ 0.02
PCDHGA12O60330 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.19■□□□□ 0.02
PCDHGA12O60330 AC145423.3-201ENST00000615987 467 ntBASIC15.19■□□□□ 0.02
PCDHGA12O60330 AL008638.5-201ENST00000623814 1298 ntBASIC15.19■□□□□ 0.02
PCDHGA12O60330 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 AC244452.3-201ENST00000636814 210 ntBASIC15.19■□□□□ 0.02
PCDHGA12O60330 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGA12O60330 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA12O60330 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 RNA5SP486-201ENST00000515961 83 ntBASIC15.18■□□□□ 0.02
PCDHGA12O60330 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 AC106872.11-201ENST00000605838 421 ntBASIC15.18■□□□□ 0.02
PCDHGA12O60330 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms