Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 PPT1-215ENST00000641471 2368 ntBASIC19.37■□□□□ 0.69
KCNQ3O43525 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.37■□□□□ 0.69
KCNQ3O43525 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNQ3O43525 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KCNQ3O43525 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNQ3O43525 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KCNQ3O43525 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
KCNQ3O43525 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KCNQ3O43525 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
KCNQ3O43525 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.37■□□□□ 0.69
KCNQ3O43525 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ3O43525 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ3O43525 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.37■□□□□ 0.69
KCNQ3O43525 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ3O43525 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNQ3O43525 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 EIF4HP1-201ENST00000453115 687 ntBASIC19.37■□□□□ 0.69
KCNQ3O43525 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ3O43525 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.37■□□□□ 0.69
KCNQ3O43525 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ3O43525 BNIP3P13-201ENST00000599968 566 ntBASIC19.37■□□□□ 0.69
KCNQ3O43525 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ3O43525 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.37■□□□□ 0.69
KCNQ3O43525 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KCNQ3O43525 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
KCNQ3O43525 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
KCNQ3O43525 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
KCNQ3O43525 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNQ3O43525 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ3O43525 TMBIM7P-203ENST00000641617 1718 ntBASIC19.37■□□□□ 0.69
KCNQ3O43525 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.36■□□□□ 0.69
KCNQ3O43525 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.36■□□□□ 0.69
KCNQ3O43525 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 MROH4P-201ENST00000431302 1578 ntBASIC19.36■□□□□ 0.69
KCNQ3O43525 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.36■□□□□ 0.69
KCNQ3O43525 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 KRT8P29-201ENST00000420409 1371 ntBASIC19.36■□□□□ 0.69
KCNQ3O43525 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 TUBBP5-203ENST00000508529 1334 ntBASIC19.36■□□□□ 0.69
KCNQ3O43525 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.36■□□□□ 0.69
KCNQ3O43525 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.36■□□□□ 0.69
KCNQ3O43525 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
KCNQ3O43525 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.36■□□□□ 0.69
KCNQ3O43525 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 AC105129.2-201ENST00000559536 390 ntBASIC19.36■□□□□ 0.69
KCNQ3O43525 NDUFV2P1-201ENST00000596415 907 ntBASIC19.36■□□□□ 0.69
KCNQ3O43525 AL645939.5-201ENST00000606834 243 ntBASIC19.36■□□□□ 0.69
KCNQ3O43525 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
KCNQ3O43525 AC097724.1-201ENST00000609581 426 ntBASIC19.36■□□□□ 0.69
KCNQ3O43525 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
KCNQ3O43525 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.36■□□□□ 0.69
KCNQ3O43525 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNQ3O43525 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.36■□□□□ 0.69
KCNQ3O43525 AC126365.1-201ENST00000578585 1514 ntBASIC19.35■□□□□ 0.69
KCNQ3O43525 AC091951.1-201ENST00000512854 2465 ntBASIC19.35■□□□□ 0.69
KCNQ3O43525 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
KCNQ3O43525 AC003102.2-201ENST00000589195 1469 ntBASIC19.35■□□□□ 0.69
KCNQ3O43525 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
KCNQ3O43525 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
KCNQ3O43525 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNQ3O43525 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNQ3O43525 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.35■□□□□ 0.69
KCNQ3O43525 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNQ3O43525 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KCNQ3O43525 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
KCNQ3O43525 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms