Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HOXA2O43364 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 AL137783.1-201ENST00000623494 1896 ntBASIC16.22■□□□□ 0.19
HOXA2O43364 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXA2O43364 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 REXO1L4P-201ENST00000605109 1937 ntBASIC16.22■□□□□ 0.19
HOXA2O43364 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.22■□□□□ 0.19
HOXA2O43364 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HOXA2O43364 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.22■□□□□ 0.19
HOXA2O43364 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.22■□□□□ 0.19
HOXA2O43364 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.22■□□□□ 0.19
HOXA2O43364 RNMTL1P1-201ENST00000454103 560 ntBASIC16.22■□□□□ 0.19
HOXA2O43364 RN7SL11P-201ENST00000471305 293 ntBASIC16.22■□□□□ 0.19
HOXA2O43364 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXA2O43364 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.22■□□□□ 0.19
HOXA2O43364 RN7SL720P-201ENST00000488178 304 ntBASIC16.22■□□□□ 0.19
HOXA2O43364 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.22■□□□□ 0.19
HOXA2O43364 AC008825.2-201ENST00000603374 718 ntBASIC16.22■□□□□ 0.19
HOXA2O43364 AL645939.5-201ENST00000606834 243 ntBASIC16.22■□□□□ 0.19
HOXA2O43364 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXA2O43364 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.22■□□□□ 0.19
HOXA2O43364 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXA2O43364 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXA2O43364 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXA2O43364 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 SHC1P1-201ENST00000425230 1745 ntBASIC16.22■□□□□ 0.19
HOXA2O43364 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HOXA2O43364 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.22■□□□□ 0.19
HOXA2O43364 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXA2O43364 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HOXA2O43364 AC009090.5-201ENST00000624886 2285 ntBASIC16.21■□□□□ 0.19
HOXA2O43364 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.21■□□□□ 0.19
HOXA2O43364 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXA2O43364 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HOXA2O43364 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HOXA2O43364 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXA2O43364 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.21■□□□□ 0.19
HOXA2O43364 AC010141.1-201ENST00000411585 623 ntBASIC16.21■□□□□ 0.19
HOXA2O43364 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.21■□□□□ 0.19
HOXA2O43364 DUX4L46-201ENST00000566845 751 ntBASIC16.21■□□□□ 0.19
HOXA2O43364 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HOXA2O43364 RN7SL774P-201ENST00000577467 290 ntBASIC16.21■□□□□ 0.19
HOXA2O43364 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 AC005324.6-201ENST00000587972 613 ntBASIC16.21■□□□□ 0.19
HOXA2O43364 AC026740.1-201ENST00000607068 791 ntBASIC16.21■□□□□ 0.19
HOXA2O43364 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.21■□□□□ 0.19
HOXA2O43364 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.21■□□□□ 0.19
HOXA2O43364 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 MST1L-201ENST00000442552 2185 ntBASIC16.21■□□□□ 0.19
HOXA2O43364 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HOXA2O43364 KRT8P19-201ENST00000551916 1455 ntBASIC16.21■□□□□ 0.19
HOXA2O43364 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.21■□□□□ 0.18
HOXA2O43364 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HOXA2O43364 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.21■□□□□ 0.18
HOXA2O43364 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
HOXA2O43364 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXA2O43364 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXA2O43364 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
HOXA2O43364 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HOXA2O43364 CICP11-201ENST00000434745 2827 ntBASIC16.2■□□□□ 0.18
HOXA2O43364 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HOXA2O43364 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.2■□□□□ 0.18
HOXA2O43364 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HOXA2O43364 AC004899.1-201ENST00000424687 1714 ntBASIC16.2■□□□□ 0.18
HOXA2O43364 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HOXA2O43364 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXA2O43364 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXA2O43364 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXA2O43364 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXA2O43364 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXA2O43364 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.2■□□□□ 0.18
HOXA2O43364 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXA2O43364 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.2■□□□□ 0.18
HOXA2O43364 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms