Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.56■□□□□ 0.08
RIPK2O43353 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.56■□□□□ 0.08
RIPK2O43353 AL591424.1-201ENST00000442569 1213 ntBASIC15.56■□□□□ 0.08
RIPK2O43353 KRT18P3-201ENST00000451602 1288 ntBASIC15.56■□□□□ 0.08
RIPK2O43353 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
RIPK2O43353 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
RIPK2O43353 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.56■□□□□ 0.08
RIPK2O43353 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.56■□□□□ 0.08
RIPK2O43353 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.56■□□□□ 0.08
RIPK2O43353 AC140113.2-201ENST00000604370 208 ntBASIC15.56■□□□□ 0.08
RIPK2O43353 AC018529.1-201ENST00000613063 361 ntBASIC15.56■□□□□ 0.08
RIPK2O43353 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.56■□□□□ 0.08
RIPK2O43353 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.56■□□□□ 0.08
RIPK2O43353 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.56■□□□□ 0.08
RIPK2O43353 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.56■□□□□ 0.08
RIPK2O43353 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.56■□□□□ 0.08
RIPK2O43353 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 AC023090.2-201ENST00000625182 2110 ntBASIC15.56■□□□□ 0.08
RIPK2O43353 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RIPK2O43353 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.56■□□□□ 0.08
RIPK2O43353 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
RIPK2O43353 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RIPK2O43353 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RIPK2O43353 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RIPK2O43353 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.55■□□□□ 0.08
RIPK2O43353 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.55■□□□□ 0.08
RIPK2O43353 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.55■□□□□ 0.08
RIPK2O43353 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
RIPK2O43353 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RIPK2O43353 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.55■□□□□ 0.08
RIPK2O43353 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.55■□□□□ 0.08
RIPK2O43353 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.55■□□□□ 0.08
RIPK2O43353 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RIPK2O43353 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.55■□□□□ 0.08
RIPK2O43353 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.55■□□□□ 0.08
RIPK2O43353 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.55■□□□□ 0.08
RIPK2O43353 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.55■□□□□ 0.08
RIPK2O43353 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.55■□□□□ 0.08
RIPK2O43353 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.55■□□□□ 0.08
RIPK2O43353 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RIPK2O43353 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.55■□□□□ 0.08
RIPK2O43353 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RIPK2O43353 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RIPK2O43353 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
RIPK2O43353 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.55■□□□□ 0.08
RIPK2O43353 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.55■□□□□ 0.08
RIPK2O43353 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RIPK2O43353 AL354702.1-201ENST00000442006 1960 ntBASIC15.55■□□□□ 0.08
RIPK2O43353 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RIPK2O43353 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.54■□□□□ 0.08
RIPK2O43353 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
RIPK2O43353 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.54■□□□□ 0.08
RIPK2O43353 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 Z97205.2-201ENST00000564697 1639 ntBASIC15.54■□□□□ 0.08
RIPK2O43353 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.54■□□□□ 0.08
RIPK2O43353 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.54■□□□□ 0.08
RIPK2O43353 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
RIPK2O43353 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.54■□□□□ 0.08
RIPK2O43353 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RIPK2O43353 ZNF259P1-201ENST00000407656 1365 ntBASIC15.54■□□□□ 0.08
RIPK2O43353 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RIPK2O43353 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 IL9RP2-201ENST00000423948 1312 ntBASIC15.54■□□□□ 0.08
RIPK2O43353 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RIPK2O43353 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.54■□□□□ 0.08
RIPK2O43353 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RIPK2O43353 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms