Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC20.55■□□□□ 0.88
CHD2O14647 AC068867.1-201ENST00000559855 150 ntBASIC20.55■□□□□ 0.88
CHD2O14647 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC20.55■□□□□ 0.88
CHD2O14647 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD2O14647 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD2O14647 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD2O14647 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.55■□□□□ 0.88
CHD2O14647 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD2O14647 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD2O14647 AD000864.1-201ENST00000624076 2295 ntBASIC20.55■□□□□ 0.88
CHD2O14647 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD2O14647 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD2O14647 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC20.55■□□□□ 0.88
CHD2O14647 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD2O14647 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD2O14647 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.55■□□□□ 0.88
CHD2O14647 FAM90A21P-201ENST00000510875 1396 ntBASIC20.55■□□□□ 0.88
CHD2O14647 FAM90A15P-201ENST00000514465 1395 ntBASIC20.55■□□□□ 0.88
CHD2O14647 FAM90A6P-201ENST00000515148 1394 ntBASIC20.55■□□□□ 0.88
CHD2O14647 FAM90A16P-201ENST00000526662 1395 ntBASIC20.55■□□□□ 0.88
CHD2O14647 FAM90A9P-201ENST00000527940 1395 ntBASIC20.55■□□□□ 0.88
CHD2O14647 FAM90A5P-201ENST00000528738 1395 ntBASIC20.55■□□□□ 0.88
CHD2O14647 FAM90A14P-201ENST00000530386 1395 ntBASIC20.55■□□□□ 0.88
CHD2O14647 FAM90A13P-201ENST00000534703 1395 ntBASIC20.55■□□□□ 0.88
CHD2O14647 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC20.55■□□□□ 0.88
CHD2O14647 KRT17P5-201ENST00000332088 839 ntBASIC20.55■□□□□ 0.88
CHD2O14647 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD2O14647 AC108734.2-201ENST00000420887 1069 ntBASIC20.55■□□□□ 0.88
CHD2O14647 RGS5-216ENST00000449680 788 ntTSL 3 BASIC20.55■□□□□ 0.88
CHD2O14647 DUX4L50-201ENST00000455245 715 ntBASIC20.55■□□□□ 0.88
CHD2O14647 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD2O14647 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHD2O14647 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CHD2O14647 PLS3-210ENST00000626746 216 ntTSL 4 BASIC20.55■□□□□ 0.88
CHD2O14647 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.55■□□□□ 0.88
CHD2O14647 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 AC025183.3-201ENST00000623526 1482 ntBASIC20.54■□□□□ 0.88
CHD2O14647 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD2O14647 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD2O14647 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD2O14647 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD2O14647 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD2O14647 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CHD2O14647 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHD2O14647 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD2O14647 CELP-201ENST00000411440 1249 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD2O14647 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD2O14647 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD2O14647 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD2O14647 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD2O14647 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD2O14647 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD2O14647 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD2O14647 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD2O14647 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD2O14647 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHD2O14647 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD2O14647 AC092580.1-201ENST00000433998 658 ntBASIC20.53■□□□□ 0.88
CHD2O14647 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD2O14647 PPIA-208ENST00000489459 907 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD2O14647 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 HERC2P11-201ENST00000562845 725 ntBASIC20.53■□□□□ 0.88
CHD2O14647 AC100756.2-201ENST00000569537 736 ntBASIC20.53■□□□□ 0.88
CHD2O14647 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CHD2O14647 PPIA-210ENST00000620047 827 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD2O14647 MVK-217ENST00000639206 367 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD2O14647 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD2O14647 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD2O14647 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.53■□□□□ 0.88
CHD2O14647 AC090616.6-203ENST00000579186 1945 ntBASIC20.53■□□□□ 0.88
CHD2O14647 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD2O14647 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD2O14647 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD2O14647 RN7SL277P-201ENST00000481521 288 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms