Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AL137013.1-201ENST00000432946 1228 ntBASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC010203.1-204ENST00000548782 407 ntBASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MIR4492-201ENST00000581627 80 ntBASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AL645937.6-201ENST00000641122 3727 ntBASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 WASH6P-202ENST00000359512 1437 ntBASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 KRT8P22-201ENST00000562317 1415 ntBASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AL583810.2-201ENST00000556430 3254 ntBASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC007967.3-201ENST00000434308 558 ntBASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC097493.4-201ENST00000641197 219 ntBASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms