Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 AL162726.2-201ENST00000438986 1017 ntBASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 AP001063.1-201ENST00000568332 529 ntBASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 CU634019.7-201ENST00000624153 1185 ntBASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 FP236241.2-201ENST00000624906 1185 ntBASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NPIPB9F8W1W9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 ACTBP8-201ENST00000403258 1108 ntBASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 EIF3FP3-201ENST00000434851 1086 ntBASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 AC022137.2-201ENST00000503482 481 ntBASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 AC022616.1-201ENST00000518688 554 ntBASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 AP002414.2-201ENST00000591780 3365 ntBASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 AC007292.2-201ENST00000593524 1812 ntBASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB9F8W1W9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB9F8W1W9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB9F8W1W9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB9F8W1W9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NPIPB9F8W1W9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NPIPB9F8W1W9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NPIPB9F8W1W9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB9F8W1W9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms