Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 AC092933.1-201ENST00000393644 945 ntBASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 AC016694.1-201ENST00000434179 700 ntBASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 RPL7P3-201ENST00000441388 714 ntBASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 AC106760.1-201ENST00000508690 800 ntBASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA2E9PIF3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 AC136621.1-201ENST00000624017 2304 ntBASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 SSR4P1-203ENST00000599569 2260 ntBASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA2E9PIF3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA2E9PIF3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms