Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 ACTBP8-201ENST00000403258 1108 ntBASIC13.5□□□□□ -0.25
NPIPB4C9JG80 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 AL162726.2-201ENST00000438986 1017 ntBASIC13.5□□□□□ -0.25
NPIPB4C9JG80 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB4C9JG80 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 AC007541.1-201ENST00000570282 1469 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 LINC00552-201ENST00000625151 2579 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 LINC02228-204ENST00000642115 2962 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 AC140479.7-201ENST00000636301 2332 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 RNU1-114P-201ENST00000365297 166 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 KLF2P2-201ENST00000416807 1039 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 TLE1P1-201ENST00000422965 589 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 BCRP1-201ENST00000444246 691 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 MYCLP2-201ENST00000449268 967 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 API5-211ENST00000534695 560 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 SPCS2P1-201ENST00000561636 679 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 AP001063.1-201ENST00000568332 529 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPB4C9JG80 AC113367.3-201ENST00000508316 1912 ntBASIC13.49□□□□□ -0.25
NPIPB4C9JG80 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPB4C9JG80 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPB4C9JG80 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPB4C9JG80 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPB4C9JG80 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NPIPB4C9JG80 AC018529.2-202ENST00000611482 3087 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms