Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 AC034105.1-201ENST00000563488 319 ntBASIC16.4■□□□□ 0.22
CTAGE9A4FU28 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 AC107918.4-201ENST00000641966 3141 ntBASIC16.4■□□□□ 0.22
CTAGE9A4FU28 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTAGE9A4FU28 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CTAGE9A4FU28 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CTAGE9A4FU28 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 AC007787.1-201ENST00000588095 1583 ntBASIC16.39■□□□□ 0.21
CTAGE9A4FU28 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 AC074386.1-202ENST00000463561 864 ntBASIC16.39■□□□□ 0.21
CTAGE9A4FU28 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 AL121894.2-201ENST00000602977 491 ntBASIC16.39■□□□□ 0.21
CTAGE9A4FU28 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 CICP17-201ENST00000418553 2377 ntBASIC16.39■□□□□ 0.21
CTAGE9A4FU28 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 IL9RP2-201ENST00000423948 1312 ntBASIC16.39■□□□□ 0.21
CTAGE9A4FU28 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTAGE9A4FU28 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTAGE9A4FU28 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTAGE9A4FU28 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CTAGE9A4FU28 AC055811.4-201ENST00000624039 1754 ntBASIC16.38■□□□□ 0.21
CTAGE9A4FU28 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.38■□□□□ 0.21
CTAGE9A4FU28 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTAGE9A4FU28 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTAGE9A4FU28 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTAGE9A4FU28 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CTAGE9A4FU28 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTAGE9A4FU28 AC089987.1-201ENST00000551654 2209 ntBASIC16.38■□□□□ 0.21
CTAGE9A4FU28 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms