Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 AC117489.1-201ENST00000625169 3217 ntBASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 LILRP1-201ENST00000444199 1370 ntBASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 AC010327.5-201ENST00000586923 3061 ntBASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 AP3S2-216ENST00000617003 1561 ntBASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.52□□□□□ -0.4
DUXBA0A1W2PPF3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 MST1P2-201ENST00000457982 2291 ntBASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 FAAHP1-202ENST00000446499 1238 ntBASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 AC145285.3-201ENST00000564603 959 ntBASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 AP001005.1-201ENST00000571755 1248 ntBASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 AC012313.10-201ENST00000623509 926 ntBASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 KRT8P22-201ENST00000562317 1415 ntBASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DUXBA0A1W2PPF3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.51□□□□□ -0.41
DUXBA0A1W2PPF3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms