Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 MIR4469-201ENST00000583919 79 ntBASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC004835.2-201ENST00000603762 682 ntBASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC012508.2-201ENST00000567613 1472 ntBASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRBV6-7A0A0A0MS04 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
TRBV6-7A0A0A0MS04 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRBV6-7A0A0A0MS04 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRBV6-7A0A0A0MS04 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 CICP8-201ENST00000455800 2813 ntBASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC104457.1-201ENST00000401024 814 ntBASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 SERBP1P3-201ENST00000459980 809 ntBASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 MIR4453-201ENST00000584019 89 ntBASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV6-7A0A0A0MS04 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV6-7A0A0A0MS04 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.82□□□□□ -0.36
TRBV6-7A0A0A0MS04 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRBV6-7A0A0A0MS04 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.82□□□□□ -0.36
TRBV6-7A0A0A0MS04 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
TRBV6-7A0A0A0MS04 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV6-7A0A0A0MS04 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV6-7A0A0A0MS04 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms