Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 AL360270.3-201ENST00000609118 1348 ntBASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 LILRP1-201ENST00000444199 1370 ntBASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 DOC2GP-202ENST00000514950 1163 ntBASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 AC005498.2-205ENST00000593218 784 ntBASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 AL009178.2-201ENST00000597278 2719 ntBASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CYP46A1Q9Y6A2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 DRD5P1-201ENST00000456605 1438 ntBASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 TPRX2P-201ENST00000535362 881 ntBASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 AC023310.3-201ENST00000557027 670 ntBASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 AC100756.1-201ENST00000562736 682 ntBASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 AC138749.3-201ENST00000567691 622 ntBASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 AC116165.1-201ENST00000611806 668 ntBASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 AC023908.3-201ENST00000564211 3047 ntBASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms