Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 METTL21AP1-201ENST00000438852 635 ntBASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 LINC00628-201ENST00000628516 1289 ntBASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 HLA-H-201ENST00000383620 1096 ntBASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 SPDYE7P-202ENST00000420373 878 ntBASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 RNA5SP410-201ENST00000516285 106 ntBASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 AC008677.1-201ENST00000519230 1561 ntBASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3HCC1Q9Y3T6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 CR383656.2-201ENST00000548656 2254 ntBASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 BX640514.1-201ENST00000583223 1918 ntBASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 AC092183.1-201ENST00000469884 875 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms