Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AL928921.2-201ENST00000641325 2442 ntBASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AC084121.4-201ENST00000641598 221 ntBASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AL645728.2-202ENST00000641679 227 ntBASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AF228730.8-201ENST00000642140 221 ntBASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
UBE2D4Q9Y2X8 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC10.71□□□□□ -0.7
UBE2D4Q9Y2X8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
UBE2D4Q9Y2X8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
UBE2D4Q9Y2X8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
UBE2D4Q9Y2X8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
UBE2D4Q9Y2X8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
UBE2D4Q9Y2X8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 ZNF259P1-201ENST00000407656 1365 ntBASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 SPDYE17-201ENST00000412399 783 ntBASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 AL591424.1-201ENST00000442569 1213 ntBASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 TIMM8BP1-201ENST00000452384 211 ntBASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 SLED1-202ENST00000512051 380 ntBASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 AC105021.1-202ENST00000570572 669 ntBASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 AC055717.3-201ENST00000622967 595 ntBASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 FES-203ENST00000394302 2133 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 AC092135.3-201ENST00000624151 1846 ntBASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2D4Q9Y2X8 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms