Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 AC093433.1-201ENST00000458048 571 ntBASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 AC005225.4-201ENST00000557330 545 ntBASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 MIR5189-201ENST00000577370 114 ntBASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 AC012645.4-201ENST00000610691 1061 ntBASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DTX4Q9Y2E6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 AJ011931.1-201ENST00000618749 2492 ntBASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 NME2P1-201ENST00000426182 414 ntBASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 PRSS30P-206ENST00000641773 873 ntBASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
DTX4Q9Y2E6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms