Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 AL359711.2-201ENST00000563105 872 ntBASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 WASH4P-201ENST00000564273 1246 ntBASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 TMEM261P1-201ENST00000604899 340 ntBASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 AC008494.3-201ENST00000606615 944 ntBASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 LINC02228-204ENST00000642115 2962 ntBASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 AL157414.3-201ENST00000624276 1954 ntBASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 ELK1P1-201ENST00000485699 580 ntBASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 AL360270.3-201ENST00000609118 1348 ntBASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4E1Q9UPM8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 KRT8P22-201ENST00000562317 1415 ntBASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 CICP24-201ENST00000605464 2705 ntBASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 SOCS2P1-201ENST00000417727 557 ntBASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4E1Q9UPM8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms