Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 POM121L8P-201ENST00000417732 1281 ntBASIC16.11■□□□□ 0.17
CDH9Q9ULB4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 POM121L9P-203ENST00000441984 1285 ntBASIC16.11■□□□□ 0.17
CDH9Q9ULB4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 RNA5SP412-201ENST00000516234 123 ntBASIC16.11■□□□□ 0.17
CDH9Q9ULB4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 AL137783.1-201ENST00000623494 1896 ntBASIC16.11■□□□□ 0.17
CDH9Q9ULB4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
CDH9Q9ULB4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 FAM21FP-201ENST00000426241 1131 ntBASIC16.1■□□□□ 0.17
CDH9Q9ULB4 AC007274.1-201ENST00000439805 662 ntBASIC16.1■□□□□ 0.17
CDH9Q9ULB4 YBX1P6-201ENST00000442962 1002 ntBASIC16.1■□□□□ 0.17
CDH9Q9ULB4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 LILRP1-201ENST00000444199 1370 ntBASIC16.1■□□□□ 0.17
CDH9Q9ULB4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH9Q9ULB4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms