Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 HPN-206ENST00000597419 1212 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC19.16■□□□□ 0.66
SCN11AQ9UI33 AC051619.9-201ENST00000623237 597 ntBASIC19.16■□□□□ 0.66
SCN11AQ9UI33 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 KRT8P31-201ENST00000504812 1408 ntBASIC19.16■□□□□ 0.66
SCN11AQ9UI33 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 NCR3-202ENST00000376071 541 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 MIR3188-201ENST00000583494 85 ntBASIC19.16■□□□□ 0.66
SCN11AQ9UI33 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 AP003419.4-201ENST00000616071 517 ntBASIC19.16■□□□□ 0.66
SCN11AQ9UI33 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 LINC01101-201ENST00000622953 1884 ntBASIC19.15■□□□□ 0.66
SCN11AQ9UI33 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 AC019193.1-201ENST00000506678 823 ntBASIC19.15■□□□□ 0.66
SCN11AQ9UI33 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 MIR5572-201ENST00000583188 137 ntBASIC19.15■□□□□ 0.66
SCN11AQ9UI33 AL109837.1-201ENST00000603272 613 ntBASIC19.15■□□□□ 0.66
SCN11AQ9UI33 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN11AQ9UI33 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SCN11AQ9UI33 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC19.14■□□□□ 0.66
SCN11AQ9UI33 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SCN11AQ9UI33 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SCN11AQ9UI33 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SCN11AQ9UI33 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.14■□□□□ 0.66
SCN11AQ9UI33 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SCN11AQ9UI33 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.14■□□□□ 0.66
SCN11AQ9UI33 RPL17P45-201ENST00000586289 509 ntBASIC19.14■□□□□ 0.66
SCN11AQ9UI33 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 AC015909.3-201ENST00000572855 1794 ntBASIC19.14■□□□□ 0.65
SCN11AQ9UI33 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 ACE3P-201ENST00000423435 1973 ntBASIC19.14■□□□□ 0.65
SCN11AQ9UI33 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 FRMPD2B-201ENST00000431305 1347 ntBASIC19.14■□□□□ 0.65
SCN11AQ9UI33 AC006480.2-201ENST00000609770 1337 ntBASIC19.14■□□□□ 0.65
SCN11AQ9UI33 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN11AQ9UI33 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms