Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 LRRC59-203ENST00000576448 1531 ntBASIC14.08□□□□□ -0.16
LRFN1Q9P244 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 AC007787.1-201ENST00000588095 1583 ntBASIC14.08□□□□□ -0.16
LRFN1Q9P244 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 SBF1P1-201ENST00000444527 5631 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 AC092850.2-201ENST00000623821 2697 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 BRWD1P1-201ENST00000401091 371 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 FAM197Y7-201ENST00000432892 766 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 AC023310.1-201ENST00000554836 735 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 RN7SL219P-201ENST00000582872 296 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 AC010328.2-201ENST00000597698 1111 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 AC138951.2-201ENST00000623455 1161 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 AL645728.2-202ENST00000641679 227 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 AL158070.2-201ENST00000623713 1621 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 AL138709.1-201ENST00000614840 1693 ntBASIC14.07□□□□□ -0.16
LRFN1Q9P244 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LRFN1Q9P244 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRFN1Q9P244 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 FAM86MP-201ENST00000340703 885 ntBASIC14.06□□□□□ -0.16
LRFN1Q9P244 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 AL355994.2-201ENST00000447882 704 ntBASIC14.06□□□□□ -0.16
LRFN1Q9P244 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms