Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 AC190387.1-201ENST00000551683 408 ntBASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 AC008494.3-201ENST00000606615 944 ntBASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 BX539320.1-201ENST00000623759 877 ntBASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 OR2I1P-209ENST00000641730 5365 ntBASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 KRT8P22-201ENST00000562317 1415 ntBASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 ENPP7P5-201ENST00000541031 1031 ntBASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 AL359711.2-201ENST00000563105 872 ntBASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 AC124283.3-201ENST00000570869 594 ntBASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 AL360270.3-201ENST00000609118 1348 ntBASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.09□□□□□ -0.15
UBQLN4Q9NRR5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.08□□□□□ -0.15
UBQLN4Q9NRR5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBQLN4Q9NRR5 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBQLN4Q9NRR5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
UBQLN4Q9NRR5 AL158070.2-201ENST00000623713 1621 ntBASIC14.08□□□□□ -0.15
UBQLN4Q9NRR5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UBQLN4Q9NRR5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 ELK1P1-201ENST00000485699 580 ntBASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.08□□□□□ -0.16
UBQLN4Q9NRR5 TP53TG3HP-202ENST00000569755 579 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms