Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.86■□□□□ 0.13
HPS4Q9NQG7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 AC084346.2-201ENST00000607097 949 ntBASIC15.86■□□□□ 0.13
HPS4Q9NQG7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 AC006453.4-201ENST00000636949 1252 ntBASIC15.86■□□□□ 0.13
HPS4Q9NQG7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 AC092384.3-202ENST00000564646 2873 ntBASIC15.86■□□□□ 0.13
HPS4Q9NQG7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS4Q9NQG7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 AC148477.4-201ENST00000613430 1793 ntBASIC15.85■□□□□ 0.13
HPS4Q9NQG7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 ECM1P1-201ENST00000604092 1279 ntBASIC15.85■□□□□ 0.13
HPS4Q9NQG7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 LINC02447-202ENST00000501888 2146 ntBASIC15.85■□□□□ 0.13
HPS4Q9NQG7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS4Q9NQG7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 AC007969.1-201ENST00000433675 447 ntBASIC15.84■□□□□ 0.13
HPS4Q9NQG7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 AC114812.1-204ENST00000449669 728 ntBASIC15.84■□□□□ 0.13
HPS4Q9NQG7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms