Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 AC241585.1-201ENST00000433527 519 ntBASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 AC114501.2-201ENST00000439631 535 ntBASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 AL512638.1-201ENST00000457493 794 ntBASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 AC097493.3-201ENST00000509725 367 ntBASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NEUROD4Q9HD90 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 AL390755.1-201ENST00000623716 2027 ntBASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 TREML5P-201ENST00000421694 576 ntBASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NEUROD4Q9HD90 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms