Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PIF1Q9H611 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
PIF1Q9H611 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PIF1Q9H611 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
PIF1Q9H611 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.73□□□□□ -0.05
PIF1Q9H611 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 AP000845.1-201ENST00000581677 2131 ntBASIC14.72□□□□□ -0.05
PIF1Q9H611 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.72□□□□□ -0.05
PIF1Q9H611 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.72□□□□□ -0.05
PIF1Q9H611 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PIF1Q9H611 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
PIF1Q9H611 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
PIF1Q9H611 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PIF1Q9H611 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PIF1Q9H611 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.72□□□□□ -0.05
PIF1Q9H611 HTR5BP-201ENST00000430851 1154 ntBASIC14.72□□□□□ -0.05
PIF1Q9H611 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PIF1Q9H611 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.72□□□□□ -0.05
PIF1Q9H611 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.72□□□□□ -0.05
PIF1Q9H611 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.72□□□□□ -0.05
PIF1Q9H611 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.72□□□□□ -0.05
PIF1Q9H611 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 AC041040.2-201ENST00000622926 2899 ntBASIC14.72□□□□□ -0.05
PIF1Q9H611 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.72□□□□□ -0.05
PIF1Q9H611 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PIF1Q9H611 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.72□□□□□ -0.05
PIF1Q9H611 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.72□□□□□ -0.05
PIF1Q9H611 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.72□□□□□ -0.05
PIF1Q9H611 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.72□□□□□ -0.05
PIF1Q9H611 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PIF1Q9H611 GRK6P1-201ENST00000400595 1711 ntBASIC14.72□□□□□ -0.05
PIF1Q9H611 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.72□□□□□ -0.05
PIF1Q9H611 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PIF1Q9H611 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.71□□□□□ -0.05
PIF1Q9H611 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.71□□□□□ -0.05
PIF1Q9H611 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.71□□□□□ -0.05
PIF1Q9H611 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.71□□□□□ -0.05
PIF1Q9H611 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PIF1Q9H611 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PIF1Q9H611 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PIF1Q9H611 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.71□□□□□ -0.05
PIF1Q9H611 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
PIF1Q9H611 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PIF1Q9H611 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
PIF1Q9H611 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PIF1Q9H611 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PIF1Q9H611 AC136604.1-201ENST00000418535 575 ntBASIC14.71□□□□□ -0.05
PIF1Q9H611 TIMM8BP1-201ENST00000452384 211 ntBASIC14.71□□□□□ -0.05
PIF1Q9H611 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.71□□□□□ -0.05
PIF1Q9H611 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.71□□□□□ -0.05
PIF1Q9H611 SLC25A39P2-201ENST00000537614 270 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms