Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 AL138799.1-201ENST00000448213 1675 ntBASIC16.88■□□□□ 0.29
TRIM6Q9C030 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 KRT223P-202ENST00000449164 1292 ntBASIC16.88■□□□□ 0.29
TRIM6Q9C030 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 MIR6775-201ENST00000617557 69 ntBASIC16.88■□□□□ 0.29
TRIM6Q9C030 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM6Q9C030 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM6Q9C030 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 MSTO2P-201ENST00000314835 1709 ntBASIC16.87■□□□□ 0.29
TRIM6Q9C030 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 KLF2P4-201ENST00000451959 1225 ntBASIC16.87■□□□□ 0.29
TRIM6Q9C030 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 KRT18P25-201ENST00000508931 1278 ntBASIC16.87■□□□□ 0.29
TRIM6Q9C030 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 BX539320.1-201ENST00000623759 877 ntBASIC16.87■□□□□ 0.29
TRIM6Q9C030 COX11-210ENST00000639671 696 ntBASIC16.87■□□□□ 0.29
TRIM6Q9C030 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM6Q9C030 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM6Q9C030 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM6Q9C030 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM6Q9C030 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM6Q9C030 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM6Q9C030 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM6Q9C030 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM6Q9C030 PDIA3P1-201ENST00000471856 1510 ntBASIC16.86■□□□□ 0.29
TRIM6Q9C030 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRIM6Q9C030 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM6Q9C030 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM6Q9C030 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM6Q9C030 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms