Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 REXO1L1P-202ENST00000608646 1974 ntBASIC13.86□□□□□ -0.19
USB1Q9BQ65 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 RPL13P2-201ENST00000440687 659 ntBASIC13.86□□□□□ -0.19
USB1Q9BQ65 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 AC112187.3-201ENST00000607844 408 ntBASIC13.86□□□□□ -0.19
USB1Q9BQ65 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
USB1Q9BQ65 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USB1Q9BQ65 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AC006058.4-201ENST00000624016 1670 ntBASIC13.85□□□□□ -0.19
USB1Q9BQ65 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms