Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AJ011931.1-201ENST00000618749 2492 ntBASIC15.44■□□□□ 0.06
NDNQ99608 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDNQ99608 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NDNQ99608 MROH4P-201ENST00000431302 1578 ntBASIC15.44■□□□□ 0.06
NDNQ99608 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.44■□□□□ 0.06
NDNQ99608 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NDNQ99608 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.44■□□□□ 0.06
NDNQ99608 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDNQ99608 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDNQ99608 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDNQ99608 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
NDNQ99608 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 ZBED1P1-201ENST00000502364 1930 ntBASIC15.43■□□□□ 0.06
NDNQ99608 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.43■□□□□ 0.06
NDNQ99608 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.43■□□□□ 0.06
NDNQ99608 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 AC097493.3-201ENST00000509725 367 ntBASIC15.43■□□□□ 0.06
NDNQ99608 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NDNQ99608 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.43■□□□□ 0.06
NDNQ99608 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 AL844908.2-201ENST00000609461 460 ntBASIC15.43■□□□□ 0.06
NDNQ99608 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NDNQ99608 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NDNQ99608 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.43■□□□□ 0.06
NDNQ99608 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NDNQ99608 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NDNQ99608 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.43■□□□□ 0.06
NDNQ99608 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 AL121723.1-201ENST00000445194 1519 ntBASIC15.43■□□□□ 0.06
NDNQ99608 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 AC100757.3-201ENST00000622361 1406 ntBASIC15.43■□□□□ 0.06
NDNQ99608 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.43■□□□□ 0.06
NDNQ99608 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDNQ99608 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.43■□□□□ 0.06
NDNQ99608 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDNQ99608 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDNQ99608 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
NDNQ99608 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NDNQ99608 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NDNQ99608 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDNQ99608 CR383656.2-201ENST00000548656 2254 ntBASIC15.42■□□□□ 0.06
NDNQ99608 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
NDNQ99608 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDNQ99608 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NDNQ99608 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NDNQ99608 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDNQ99608 PTENP1-202ENST00000532280 3996 ntBASIC15.42■□□□□ 0.06
NDNQ99608 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.42■□□□□ 0.06
NDNQ99608 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDNQ99608 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NDNQ99608 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.42■□□□□ 0.06
NDNQ99608 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDNQ99608 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NDNQ99608 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NDNQ99608 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDNQ99608 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NDNQ99608 MIR943-201ENST00000401286 94 ntBASIC15.42■□□□□ 0.06
NDNQ99608 METTL21AP1-201ENST00000438852 635 ntBASIC15.42■□□□□ 0.06
NDNQ99608 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.42■□□□□ 0.06
NDNQ99608 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.42■□□□□ 0.06
NDNQ99608 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDNQ99608 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.42■□□□□ 0.06
NDNQ99608 DUX4L27-201ENST00000554796 1261 ntBASIC15.42■□□□□ 0.06
NDNQ99608 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.42■□□□□ 0.06
NDNQ99608 AC139530.3-201ENST00000620344 690 ntBASIC15.42■□□□□ 0.06
NDNQ99608 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.42■□□□□ 0.06
NDNQ99608 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms