Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 SERBP1P2-201ENST00000436888 1164 ntBASIC16.48■□□□□ 0.23
LRCH3Q96II8 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 AC024293.1-201ENST00000467930 498 ntBASIC16.48■□□□□ 0.23
LRCH3Q96II8 RN7SL67P-201ENST00000492147 296 ntBASIC16.48■□□□□ 0.23
LRCH3Q96II8 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 SCARNA21-201ENST00000517026 139 ntBASIC16.48■□□□□ 0.23
LRCH3Q96II8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 MIR6816-201ENST00000620368 66 ntBASIC16.48■□□□□ 0.23
LRCH3Q96II8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 LRRC59-203ENST00000576448 1531 ntBASIC16.47■□□□□ 0.23
LRCH3Q96II8 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 GHSR-202ENST00000427970 912 ntBASIC16.47■□□□□ 0.23
LRCH3Q96II8 PSMD4P1-201ENST00000433951 1109 ntBASIC16.47■□□□□ 0.23
LRCH3Q96II8 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 AC137695.1-201ENST00000604126 489 ntBASIC16.47■□□□□ 0.23
LRCH3Q96II8 OR13I1P-201ENST00000609811 1264 ntBASIC16.47■□□□□ 0.23
LRCH3Q96II8 AL136295.7-201ENST00000619226 1200 ntBASIC16.47■□□□□ 0.23
LRCH3Q96II8 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH3Q96II8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH3Q96II8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 RPL18AP3-201ENST00000462885 528 ntBASIC16.46■□□□□ 0.23
LRCH3Q96II8 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 RCC2P8-201ENST00000502779 1035 ntBASIC16.46■□□□□ 0.23
LRCH3Q96II8 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 AP003398.1-201ENST00000531124 318 ntBASIC16.46■□□□□ 0.23
LRCH3Q96II8 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 AC105137.3-201ENST00000617588 984 ntBASIC16.46■□□□□ 0.23
LRCH3Q96II8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms