Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 SNX18-202ENST00000343017 3140 ntBASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 LINC00552-201ENST00000625151 2579 ntBASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 AL137783.1-201ENST00000623494 1896 ntBASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 C1QBPP1-201ENST00000400117 770 ntBASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 AC114812.1-204ENST00000449669 728 ntBASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 TSPY16P-201ENST00000449843 468 ntBASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 KRT8P14-201ENST00000414254 1442 ntBASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.92□□□□□ -0.02
PDLIM5Q96HC4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AC018529.2-202ENST00000611482 3087 ntBASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AC123567.1-201ENST00000548294 1261 ntBASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms