Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC244669.2-201ENST00000612320 853 ntBASIC15.18■□□□□ 0.02
SCAMP4Q969E2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 MROH4P-201ENST00000431302 1578 ntBASIC15.18■□□□□ 0.02
SCAMP4Q969E2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 KRT8P14-201ENST00000414254 1442 ntBASIC15.17■□□□□ 0.02
SCAMP4Q969E2 LRRC59-203ENST00000576448 1531 ntBASIC15.17■□□□□ 0.02
SCAMP4Q969E2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 ANKRD19P-201ENST00000338192 862 ntBASIC15.17■□□□□ 0.02
SCAMP4Q969E2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 MIR1909-201ENST00000411312 80 ntBASIC15.17■□□□□ 0.02
SCAMP4Q969E2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 AC007551.1-201ENST00000457394 519 ntBASIC15.17■□□□□ 0.02
SCAMP4Q969E2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 DBET-201ENST00000630918 3363 ntBASIC15.17■□□□□ 0.02
SCAMP4Q969E2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAMP4Q969E2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 AL138709.1-201ENST00000614840 1693 ntBASIC15.16■□□□□ 0.02
SCAMP4Q969E2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.16■□□□□ 0.02
SCAMP4Q969E2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 ATP5G2P4-201ENST00000442175 420 ntBASIC15.16■□□□□ 0.02
SCAMP4Q969E2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 MIR6775-201ENST00000617557 69 ntBASIC15.16■□□□□ 0.02
SCAMP4Q969E2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms