Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RPGRQ92834 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RPGRQ92834 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 AC253536.4-201ENST00000440539 267 ntBASIC18.67■□□□□ 0.58
RPGRQ92834 AC006335.1-201ENST00000445200 547 ntBASIC18.67■□□□□ 0.58
RPGRQ92834 LDHBP1-201ENST00000455730 1119 ntBASIC18.67■□□□□ 0.58
RPGRQ92834 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.67■□□□□ 0.58
RPGRQ92834 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.67■□□□□ 0.58
RPGRQ92834 AF254983.2-201ENST00000612331 135 ntBASIC18.67■□□□□ 0.58
RPGRQ92834 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RPGRQ92834 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RPGRQ92834 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.67■□□□□ 0.58
RPGRQ92834 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.67■□□□□ 0.58
RPGRQ92834 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.67■□□□□ 0.58
RPGRQ92834 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RPGRQ92834 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.67■□□□□ 0.58
RPGRQ92834 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.67■□□□□ 0.58
RPGRQ92834 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.67■□□□□ 0.58
RPGRQ92834 INE2-201ENST00000630399 1874 ntBASIC18.67■□□□□ 0.58
RPGRQ92834 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 E2F3P2-201ENST00000447755 1422 ntBASIC18.66■□□□□ 0.58
RPGRQ92834 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.66■□□□□ 0.58
RPGRQ92834 LINC02199-201ENST00000506655 2702 ntBASIC18.66■□□□□ 0.58
RPGRQ92834 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.66■□□□□ 0.58
RPGRQ92834 AL139384.1-201ENST00000612143 3047 ntBASIC18.66■□□□□ 0.58
RPGRQ92834 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.66■□□□□ 0.58
RPGRQ92834 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RPGRQ92834 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RPGRQ92834 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.66■□□□□ 0.58
RPGRQ92834 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 PUDPP3-201ENST00000445368 636 ntBASIC18.66■□□□□ 0.58
RPGRQ92834 AC234782.1-201ENST00000451950 919 ntBASIC18.66■□□□□ 0.58
RPGRQ92834 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.66■□□□□ 0.58
RPGRQ92834 RPL18P13-201ENST00000478088 569 ntBASIC18.66■□□□□ 0.58
RPGRQ92834 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.66■□□□□ 0.58
RPGRQ92834 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.66■□□□□ 0.58
RPGRQ92834 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.66■□□□□ 0.58
RPGRQ92834 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RPGRQ92834 DUX4L46-201ENST00000566845 751 ntBASIC18.66■□□□□ 0.58
RPGRQ92834 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC18.66■□□□□ 0.58
RPGRQ92834 MIR7845-201ENST00000618396 99 ntBASIC18.66■□□□□ 0.58
RPGRQ92834 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
RPGRQ92834 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.66■□□□□ 0.58
RPGRQ92834 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RPGRQ92834 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPGRQ92834 AC009093.2-202ENST00000620513 2079 ntBASIC18.65■□□□□ 0.58
RPGRQ92834 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.65■□□□□ 0.58
RPGRQ92834 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RPGRQ92834 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RPGRQ92834 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
RPGRQ92834 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
RPGRQ92834 AL137783.1-201ENST00000623494 1896 ntBASIC18.65■□□□□ 0.58
RPGRQ92834 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RPGRQ92834 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RPGRQ92834 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.65■□□□□ 0.58
RPGRQ92834 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPGRQ92834 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RPGRQ92834 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.65■□□□□ 0.58
RPGRQ92834 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.65■□□□□ 0.58
RPGRQ92834 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.65■□□□□ 0.58
RPGRQ92834 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.65■□□□□ 0.58
RPGRQ92834 AC090857.1-201ENST00000527400 390 ntBASIC18.65■□□□□ 0.58
RPGRQ92834 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.65■□□□□ 0.58
RPGRQ92834 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.65■□□□□ 0.58
RPGRQ92834 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms