Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.27■□□□□ 0.2
DDX1Q92499 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.27■□□□□ 0.2
DDX1Q92499 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.27■□□□□ 0.2
DDX1Q92499 CHCHD2P3-201ENST00000603038 451 ntBASIC16.27■□□□□ 0.2
DDX1Q92499 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DDX1Q92499 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.27■□□□□ 0.2
DDX1Q92499 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.27■□□□□ 0.2
DDX1Q92499 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 PRSS30P-206ENST00000641773 873 ntBASIC16.27■□□□□ 0.2
DDX1Q92499 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.27■□□□□ 0.2
DDX1Q92499 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.27■□□□□ 0.2
DDX1Q92499 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
DDX1Q92499 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DDX1Q92499 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DDX1Q92499 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
DDX1Q92499 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
DDX1Q92499 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DDX1Q92499 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
DDX1Q92499 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.27■□□□□ 0.19
DDX1Q92499 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.27■□□□□ 0.19
DDX1Q92499 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.27■□□□□ 0.19
DDX1Q92499 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.26■□□□□ 0.19
DDX1Q92499 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.26■□□□□ 0.19
DDX1Q92499 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
DDX1Q92499 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.26■□□□□ 0.19
DDX1Q92499 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
DDX1Q92499 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
DDX1Q92499 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.26■□□□□ 0.19
DDX1Q92499 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.26■□□□□ 0.19
DDX1Q92499 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.26■□□□□ 0.19
DDX1Q92499 AC120045.2-201ENST00000567334 178 ntBASIC16.26■□□□□ 0.19
DDX1Q92499 AC124283.3-201ENST00000570869 594 ntBASIC16.26■□□□□ 0.19
DDX1Q92499 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.26■□□□□ 0.19
DDX1Q92499 AC093813.1-201ENST00000605066 256 ntBASIC16.26■□□□□ 0.19
DDX1Q92499 AC008494.3-201ENST00000606615 944 ntBASIC16.26■□□□□ 0.19
DDX1Q92499 AC093726.1-201ENST00000608064 963 ntBASIC16.26■□□□□ 0.19
DDX1Q92499 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
DDX1Q92499 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
DDX1Q92499 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 INTS4P2-202ENST00000614726 2019 ntBASIC16.26■□□□□ 0.19
DDX1Q92499 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.26■□□□□ 0.19
DDX1Q92499 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.26■□□□□ 0.19
DDX1Q92499 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.26■□□□□ 0.19
DDX1Q92499 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DDX1Q92499 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.25■□□□□ 0.19
DDX1Q92499 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.25■□□□□ 0.19
DDX1Q92499 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.25■□□□□ 0.19
DDX1Q92499 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
DDX1Q92499 AC007292.2-201ENST00000593524 1812 ntBASIC16.25■□□□□ 0.19
DDX1Q92499 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.25■□□□□ 0.19
DDX1Q92499 AL645937.2-201ENST00000396808 931 ntBASIC16.25■□□□□ 0.19
DDX1Q92499 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
DDX1Q92499 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.25■□□□□ 0.19
DDX1Q92499 ACTBP11-201ENST00000436287 1126 ntBASIC16.25■□□□□ 0.19
DDX1Q92499 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DDX1Q92499 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.25■□□□□ 0.19
DDX1Q92499 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.25■□□□□ 0.19
DDX1Q92499 AC103810.3-201ENST00000583567 96 ntBASIC16.25■□□□□ 0.19
DDX1Q92499 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.25■□□□□ 0.19
DDX1Q92499 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.25■□□□□ 0.19
DDX1Q92499 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms