Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.27■□□□□ 0.52
SNED1Q8TER0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNED1Q8TER0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SNED1Q8TER0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SNED1Q8TER0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.27■□□□□ 0.52
SNED1Q8TER0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.27■□□□□ 0.52
SNED1Q8TER0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SNED1Q8TER0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SNED1Q8TER0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.27■□□□□ 0.51
SNED1Q8TER0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
SNED1Q8TER0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.27■□□□□ 0.51
SNED1Q8TER0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.27■□□□□ 0.51
SNED1Q8TER0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNED1Q8TER0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 TMCO5B-205ENST00000530020 894 ntBASIC18.26■□□□□ 0.51
SNED1Q8TER0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 PHBP15-201ENST00000574228 665 ntBASIC18.26■□□□□ 0.51
SNED1Q8TER0 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNED1Q8TER0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SNED1Q8TER0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 AL627231.1-201ENST00000394467 1125 ntBASIC18.25■□□□□ 0.51
SNED1Q8TER0 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 AC130709.1-201ENST00000484779 1212 ntBASIC18.25■□□□□ 0.51
SNED1Q8TER0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 AC003102.2-201ENST00000589195 1469 ntBASIC18.25■□□□□ 0.51
SNED1Q8TER0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
SNED1Q8TER0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNED1Q8TER0 AL139384.1-201ENST00000612143 3047 ntBASIC18.25■□□□□ 0.51
SNED1Q8TER0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SNED1Q8TER0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNED1Q8TER0 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms