Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 REXO1L5P-201ENST00000622260 2098 ntBASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCC2Q8TAQ2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 AL442647.2-201ENST00000429864 857 ntBASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 AL049840.4-201ENST00000602422 811 ntBASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCC2Q8TAQ2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.89■□□□□ 0.46
SMARCC2Q8TAQ2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 RPL13AP25-201ENST00000484130 612 ntBASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.89■□□□□ 0.45
SMARCC2Q8TAQ2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms